In the past few years, the emergence of combinatorial chemistry has drawn i
ncreasing attention and a great deal of analytical research has been center
ed around this new methodology. These new methods capable of producing vast
numbers of samples, which are in many cases highly complex, demand fast an
d reliable analytical techniques able to provide high quality information c
oncerning sample compositions. Mass spectrometry (MS) is the method of choi
ce to face these analytical challenges. In particular, the introduction of
electrospray ionization (ESI and matrix assisted laser desorption/ionizatio
n (MALDI)) have been the driving forces for many of the recent innovations,
not only within the fields of the biosciences, but also in combinatorial c
hemistry. These ionization techniques are extremely versatile for the chara
cterization of both single compound collections and compound mixture collec
tions. The high-throughput capabilities, as well as many possible couplings
with separation techniques (HPLC, CE) have been thus facilitated. However,
mass spectrometry is not only limited to use as an instrument for synthesi
s control, but also plays an increasing role in the identification of activ
e compounds from complex libraries. Recently, new initiatives for library a
nalysis and screening have arisen from the application of the latest develo
pments in mass spectrometry, Fourier transform ion cyclotron resonance (FTI
CR). (C) 1999 Elsevier Science B.V. All rights reserved.