The function(s) of the genes (PKD1 and PKD2) responsible for the majority o
f cases of autosomal dominant polycystic kidney disease is unknown. While P
KD1 encodes a large integral membrane protein containing several structural
motifs found in known proteins involved in cell-cell or cell-matrix intera
ctions, PKD2 has homology to PKD1 and the major subunit of the voltage-acti
vated Ca2+ channels. We now describe sequence homology between PKD2 and var
ious members of the mammalian transient receptor potential channel (TRPC) p
roteins, thought to be activated by G protein-coupled receptor activation a
nd/or depletion of internal Ca2+ stores. We show that PKD2 can directly ass
ociate with TRPC1 but not TRPC3 in transfected cells and in vitro. This ass
ociation is mediated by two distinct domains in PKD2, One domain involves a
minimal region of 73 amino acids in the C-terminal cytoplasmic tail of PKD
2 shown previously to constitute an interacting domain with PKD1, However,
distinct residues within this region mediate specific interactions with TRP
C1 or PKD1. The C-terminal domain is sufficient but not necessary for the P
KD2-TRPC1 association. A more N-terminal domain located within transmembran
e segments S2 and S5, including a putative pore helical region between S5 a
nd S6, is also responsible for the association. Given the ability of the TR
PC to form functional homo- and heteromultimeric complexes, these data prov
ide evidence that PKD2 may be functionally related to TRPC proteins and sug
gest a possible role of PKD2 in modulating Ca2+ entry in response to G prot
ein-coupled receptor activation and/or store depletion.