J. Liu et B. Wolf, COEXISTENCE OF SOMATIC HYPERMUTATION AND GENE CONVERSION IN HYPERVARIABLE REGIONS OF SINGLE IG-KAPPA CLONES, Immunology, 95(2), 1998, pp. 291-301
In the rabbit, recent investigations have provided evidence that gene
conversion leads to the generation of diversity of heavy chain rearran
ged V-H-D-H-J(H) genes. No data have been published on a similar mecha
nism for rabbit light chains. In our laboratory, we initially infected
rabbits with Trypanosoma brucei, which stimulates B-cell hyperplasia
and hypergammaglobulinaemia. The heterozygous rabbits exhibited the C
kappa 1 b4 and b9 kappa light chain allotypes. After reverse transcrip
tion of mRNA, and cloning and sequencing of cDNA, the V kappa-J kappa-
C kappa genes provided evidence for both somatic hypermutation and gen
e conversion. We saw that in each of the b4 and b9 kappa light chain c
DNA, CDR1 and CDR3 carried both point mutation and provisional gene co
nversion traits. In the CDR2 region, point mutation and gene conversio
n inserts were observed in the b4 genes, with only gene conversion in
two b9 genes. In the CDR regions, although some genes exhibited only s
omatic hypermutation or gene conversion, others showed linkage of both
somatic hypermutation and gene conversion in the same sequence. This
also marks the first time that somatic hypermutation and gene conversi
on in the same cloned CDR region has been observed in V kappa 1 genes;
however, it has been seen earlier in rabbit heavy chain VH sequences.
Furthermore, the addition of several codons to the CDR3 segment by ge
ne conversion may have provided a mechanism for length variation. In a
ddition, we demonstrated that J kappa and framework region segments co
ntained examples of somatic hypermutation. Confirmation of gene conver
sion necessitates that donor sequences be identified as providing the
templated inserts. Thus after cloning two pseudogenes we found putativ
e CDR3 donor segments for two CDR3 rearranged genes. The results offer
additional mechanisms for the generation of diversity among rearrange
d rabbit kappa light chain genes. Whether there is a relationship or i
nfluence of gene conversion upon somatic hypermutation or vice versa i
s not discernable at present.