Chromosome 'painting' refers to the hybridization of fluorescently lab
eled chromosome-specific, composite probe pools to cytological prepara
tions. Chromosome painting allows the visualization of individual chro
mosomes in metaphase or interphase cells and the identification of bot
h numerical and structural chromosomal aberrations in human pathology
with high sensitivity and specificity. In addition to human chromosome
-specific probe pools, painting probes have become available for an in
creasing range of different species, They can be applied to cross-spec
ies comparisons as well as to the study of chromosomal rearrangements
in animal models of human diseases. The simultaneous hybridization of
multiple chromosome painting probes, each tagged with a specific fluor
ochrome or fluorochrome combination, has resulted in the differential
color display of human land mouse) chromosomes, i.e. color karyotyping
. In this review, we will summarize recent developments of multicolor
chromosome painting, describe applications in basic chromosome researc
h and cytogenetic diagnostics, and discuss limitations and future dire
ctions.