QUANTITATIVE-DETERMINATION OF CMV DNA USING A COMBINATION OF COMPETITIVE PCR AMPLIFICATION AND SANDWICH HYBRIDIZATION

Citation
I. Alexandre et al., QUANTITATIVE-DETERMINATION OF CMV DNA USING A COMBINATION OF COMPETITIVE PCR AMPLIFICATION AND SANDWICH HYBRIDIZATION, BioTechniques, 25(4), 1998, pp. 676-683
Citations number
32
Categorie Soggetti
Biology,"Biochemical Research Methods
Journal title
ISSN journal
07366205
Volume
25
Issue
4
Year of publication
1998
Pages
676 - 683
Database
ISI
SICI code
0736-6205(1998)25:4<676:QOCDUA>2.0.ZU;2-D
Abstract
A quantitative PCR method is proposed that combines the use of a compe titive internal standard with the sandwich hybridization of the produc ts. The variability of the PCR efficiency was corrected using a specif ically designed internal standard competitive not only for the PCR amp lification, but also for the hybridization on capture probes fixed ont o microwells. The design of such standard gave a dynamic range extendi ng from 30-1 million copies of target DNA when the internal standard c opy number was fixed to 1000 using a simple colorimetric detection. Th e assay was independent from the number of PCR cycles, which indicates a true competition between the standard and the template DNA. The ass ay was developed for a cytomegalovirus (CMV) DNA sequence and is illus trated by the quantification of CMV in a culture sample.