Achalasia is a motor disorder of the esophagus resulting in functional
obstruction, The cause of the lesion is unknown although genetic and
immunologic factors have been suggested. An association with serologic
al HLA epitopes has been previously reported, In this study, we have f
urther examined this HLA class II association with susceptibility to a
chalasia by DNA based methods. Achalasia patients(n=40) and healthy co
ntrols (n=275), all Caucasians and unrelated, were included in the ana
lysis, The strongest associations were with HLA-DQA10101 and two HLA-
DQ alpha beta heterodimers having their alpha chain encoded by this al
lele, Moreover, relative risk was significantly higher in DQA10101 ho
mozygotes as compared to heterozygotes and results suggested that DQB1
02 may have a protective role.