As an attempt to examine the transcripts expressed in a single cell ty
pe and to unveil the physiology of guard cells at the molecular level,
we generated 515 expressed sequence tags (ESTs) from a directional cD
NA library constructed from guard-cell protoplasts of Brassica campest
ris L. ssp. pekinensis. A comparative analysis of the guard-cell ESTs
against the National Center for Biotechnological Information nonredund
ant protein database revealed that 133 ESTs (26%) have significant sim
ilarity to protein coding sequences in the database. Among them were 3
5 clones related to genes that have not yet been identified in higher
plants. Analysis of RNA gel blots of 14 database-matched clones reveal
ed that five clones harbor the sequences for mRNAs expressed most abun
dantly in guard cells, one of them detecting an mRNA with highly prefe
rential expression in guard cells. Functional categorization of the pu
tatively identified guard-cell ESTs showed, when compared with maize l
eaf ESTs, that guard cells expressed a higher proportion of signal tra
nsduction components and a lower proportion of structural or photosynt
hetic genes, as is consistent with the roles of guard cells.