C. Noula et al., NEW FLUOROGENIC SUBSTRATES FOR THE STUDY OF SECONDARY SPECIFICITY OF PROLYL OLIGOPEPTIDASE, The journal of peptide research, 49(1), 1997, pp. 46-51
The secondary specificity of prolyl oligopeptidase (POP) has been stud
ied by using a series of fluorogenic substrates containing the highly
fluorescent 7-amino-4-methyl-2-quinolinone (AMeq) marker. The substrat
es were dipeptides of the general formula Z-X-Pro-NH-Meq, bearing amin
o acid residues with variable functional groups [Met, Lys(Boc), Lys, H
is, Ser, Leu, Glu(OMe), Glu, Cys(Bzl)] at the P-2 position, and the tr
ipeptide Z-Asn-Cys(Bzl)-Pro-NH-Meq. The kinetic parameters for their h
ydrolysis by porcine kidney POP were determined at lambda(ex) = 360 nm
and lambda(em) = 430 nm. All the dipeptide substrates showed a high a
ffinity to the enzyme and could be used for its fluorometric determina
tion. The S-2 binding subsite of POP can accomodate amino acid residue
s with a bulky side group, while it prefers a positively charged group
(free Lys) instead of a negatively charged one (free Glu). (C) Munksg
aard 1997.