A. Kamlowski et al., THE QUINONE ACCEPTOR A(1) IN PHOTOSYSTEM-I - BINDING-SITE, AND COMPARISON TO Q(A) IN PURPLE BACTERIA REACTION CENTERS, JOURNAL OF PHYSICAL CHEMISTRY B, 102(42), 1998, pp. 8278-8287
The nature of the binding site of the quinone accepter A(1) in Photosy
stem I (PSI) is studied by modeling the protein and cofactor on the ba
sis of structural data derived from the intermediate resolution 4 Angs
trom X-ray diffraction electron density map, the position and orientat
ion of A(1) as evaluated from EPR data, and the histidine ligation of
P-700 as deduced from mutation experiments. Several models art: constr
ucted within the degrees of freedom allowed by the experimental constr
aints. In all cases a close interaction between the A(1) headgroup and
the side chain of PsaA-Trp697 (PsaB-Trp677) is found. The model is co
mpared to the known binding site of QA in bacterial reaction centers (
bRC) in which a similar quinone-tryptophan arrangement has been establ
ished. The results are also compared for consistency with published ma
gnetic resonance data. The influences of the protein environment on th
e semiquinone g-tensor and hyperfine couplings are considerably differ
ent in PSI and bRC. It is argued that this is mainly a result of diffe
rences in the hydrogen bonding to the protein, in the strength of the
pi-pi interactions with the tryptophan, and in the protein induced asy
mmetry in the spin density of the respective quinone radical anion.