Genetic variation at seven red blood cell alloantigen, blood group loc
i and 10 biochemical genetic loci was examined in 102 Pantaneiro horse
s from the Pantanal region of Brazil and compared to that of other dom
estic horse breeds. Measures of both individual genic variation and po
pulational genetic diversity within the Pantaneiro were near the avera
ge for domestic horse breeds. From the standpoint of genetic conservat
ion there is no immediate concern for loss of variation within the Pan
taneiro. Analysis of genetic relationship showed that the Pantaneiro w
as clearly of Iberian Peninsula descent and that it was most closely r
elated to other Brazilian breeds.