SINGULAR POINTS OF PROTEIN BETA-SHEETS

Authors
Citation
Wm. Liu et Kc. Chou, SINGULAR POINTS OF PROTEIN BETA-SHEETS, Protein science, 7(11), 1998, pp. 2324-2330
Citations number
26
Categorie Soggetti
Biology
Journal title
ISSN journal
09618368
Volume
7
Issue
11
Year of publication
1998
Pages
2324 - 2330
Database
ISI
SICI code
0961-8368(1998)7:11<2324:SPOPB>2.0.ZU;2-T
Abstract
Protein beta-sheets can be regarded as surfaces. Two surfaces can be c onnected along a common edge to form a larger surface, or two edges of a surface can coalesce to form a closed sheet such as a beta-barrel. Singular points an locations where these connections are not perfect. In protein beta-sheets, a singular point is characterized by a residue separating two beta-ladders. In this paper, we study the singular poi nts of protein beta-sheets from the surface topologic viewpoint. summa rize our search results from the protein structural data in the Protei n Data Bank. and present examples where singular points are near the a ctive sites and may contribute to forming the proper relative position s of catalytic residues.