Pj. Ala et al., COUNTERACTING HIV-1 PROTEASE DRUG-RESISTANCE - STRUCTURAL-ANALYSIS OFMUTANT PROTEASES COMPLEXED WITH XV638 AND SD146, CYCLIC UREA AMIDES WITH BROAD SPECIFICITIES, Biochemistry (Easton), 37(43), 1998, pp. 15042-15049
The long-term therapeutic benefit of HIV antiretroviral therapy is sti
ll threatened by drug-resistant variants. Mutations in the SI subsite
of the protease are the primary cause for the loss of sensitivity towa
rd many HIV protease inhibitors, including our first-generation cyclic
urea-based inhibitors DMP323 and DMP450. We now report the structures
of the three active-site mutant proteases V82F, I84V, and V82F/I84V i
n complex with XV638 and SD146, two P2 analogues of DMP323 that are 8-
fold more potent against the wild type and are able to inhibit a broad
panel of drug-resistant variants [Jadhav, P. K., et al. (1997) J. Med
. Chem. 40, 181-191]. The increased efficacy of XV638 and SD146 is due
primarily to an increase in P2-S2 interactions: 30-40% more van der W
aals contacts and two to four additional hydrogen bonds. Furthermore,
because these new interactions do not perturb other subsites in the pr
otease, it appears that the large complementary surface areas of their
P2 substituents compensate for the loss of P1-S1 interactions and red
uce the probability of selecting for drug-resistant variants.