PHYLOGENETIC-RELATIONSHIPS AMONG THE CHROMATIACEAE, THEIR TAXONOMIC RECLASSIFICATION AND DESCRIPTION OF THE NEW GENERA ALLOCHROMATIUM, HALOCHROMATIUM, ISOCHROMATIUM, MARICHROMATIUM, THIOCOCCUS, THIOHALOCAPSA AND THERMOCHROMATIUM
Jf. Imhoff et al., PHYLOGENETIC-RELATIONSHIPS AMONG THE CHROMATIACEAE, THEIR TAXONOMIC RECLASSIFICATION AND DESCRIPTION OF THE NEW GENERA ALLOCHROMATIUM, HALOCHROMATIUM, ISOCHROMATIUM, MARICHROMATIUM, THIOCOCCUS, THIOHALOCAPSA AND THERMOCHROMATIUM, International journal of systematic bacteriology, 48, 1998, pp. 1129-1143
Sequences of the 16S rDNA from ail available type strains of Chromatiu
m species have been determined and were compared to those of other Chr
omatiaceae, a few selected Ectothiorhodospiraceae and Escherichia coil
. The clear separation of Ectothiorhodospiraceae and Chromatiaceae is
confirmed. Most significantly the sequence comparison revealed a genet
ic divergence between Chromatium species originated from freshwater so
urces and those of truly marine and halophilic nature. Major phylogene
tic branches of the Chromatiaceae contain (i) marine and halophilic sp
ecies, (ii) freshwater Chromatium species together with Thiocystis spe
cies and (iii) species of the genera Thiocapsa and Amoebobacter as rec
ently reclassified [Guyoneaud. R. & 6 other authors (1998). Int J Syst
Bacteriol 48, 957-964], namely Thiocapsa roseopersicina, Thiocapsa pe
ndens (formerly Amoebobacter pendens), Thiocapsa roses (formerly Amoeb
obacter roseus), Amoebobacter purpureus and Thiolamprovum pedioforme (
formerly Amoebobacter pedioformis). The genetic relationships between
the species and groups are not in congruence with the current classifi
cation of the Chromatiaceae and a reclassification is proposed on the
basis of 16S rDNA sequence similarity supported by selected phenotypic
properties. The proposed changes include the transfers of Chromatium
minus and Chromatium violascens to Thiocystis minor comb. nov. and Thi
ocystis violascens comb. nov., of Chromatium vinosum, Chromatium minut
issimum and Chromatium warmingii to the new genus Allochromatium. as A
llochromatium vinosum comb. nov., Allochromatium minutissimum comb. no
v., and Allochromatium warmingii comb. nov., of Chromatium tepidum to
the new genus Thermochromatium as Thermochromatium tepidum comb. nov.,
of Chromatium salexigens and Chromatium glycolicum to the new genus H
alochromatium as Halochromatium salexigens comb. nov. and Halochromati
um glycolicum comb. nov., of Chromatium gracile and Chromatium purpura
tum to the new genus as Marichromatium gracile comb. nov. and Marichro
matium purpuratum comb, nov., of Thiocapsa pfennigii to Thiococcus pfe
nnigii gen. nom. rev., of Thiocapsa halophila to the new genus Thiohal
ocapsa as Thiohalocapsa halophila comb. nov., and of Chromatium buderi
to the new genus Isochromatium as Isochromatium buderi comb. nov.