Rj. Phillips et al., NUCLEOTIDE-SEQUENCE OF THE 5'-TERMINUS OF NEWCASTLE-DISEASE-VIRUS ANDASSEMBLY OF THE COMPLETE GENOMIC SEQUENCE - AGREEMENT WITH THE RULE-OF-6, Archives of virology, 143(10), 1998, pp. 1993-2002
We have determined the sequences of the 5' ends of three strains of Ne
wcastle disease virus, permitting the assembly of the entire genomic s
equence, which amounts to 15,186 nucleotides. This length is in agreem
ent with the rule of six, which has been shown to determine replicatio
n efficiency in similar viruses. Comparison of the extreme 5' end of t
he trailer sequence with that of the 3'-terminal leader sequence of th
e virus reveals a high degree of complementarity. Variation between th
e 5'-terminal sequences of the different strains reveals the presence
of alternative L gene polyadenylation signals, leading to correspondin
gly different trailer lengths.