S. Solismendiola et al., PH-DEPENDENCE OF THE ACTIVATION PARAMETERS FOR CHYMOPAPAIN UNFOLDING - INFLUENCE OF ION-PAIRS ON THE KINETIC STABILITY OF PROTEINS, Biochimica et biophysica acta. Protein structure and molecular enzymology, 1388(2), 1998, pp. 363-372
We studied the irreversible thermal denaturation of chymopapain, a pap
ain-related cysteine proteinase. It was found that this process follow
s simple first-order kinetics under all conditions tested. Rate consta
nts determined by monitoring ellipticity changes at 220 or 279 nm are
essentially identical, indicating that denaturation involves global un
folding of the protein. Enthalpies (Delta H double dagger) and entropi
es (Delta S double dagger) of activation for unfolding were determined
at various pH values from the temperature dependence of the rate cons
tant. In the pH range 1.1-3.0, a large variation of both Delta H doubl
e dagger and Delta S double dagger was observed. For the few proteins
studied so far (lysozyme, trypsin, barnase) it is known that activatio
n parameters for unfolding vary little with pH. It is proposed that th
is contrasting behavior of chymopapain originates from the numerous io
n pairs - especially those with low solvent accessibilities - present
in its molecular structure. In contrast, fewer, more exposed ion pairs
are present in the other proteins mentioned above. Our results were a
nalyzed in terms of differences in the protonation behavior of carboxy
lic groups between the transition (TS) and native (N) states of the pr
otein. For this purpose, a model of independently titrating sites was
assumed, which explained reasonably well the pH dependence of activati
on parameters, as well as the protonation properties of native chymopa
pain. According to these calculations, pK values of carboxyls in TS ar
e shifted 0.6-0.9 units upwards with respect to those in N. In additio
n, some groups in TS appear to be protonated with unusually large enth
alpy changes. (C) 1998 Elsevier Science B.V. All rights reserved.