CHARACTERIZATION OF PK(A) VALUES AND TITRATION SHIFTS IN THE CYTOTOXIC RIBONUCLEASE ALPHA-SARCIN BY NMR - RELATIONSHIP BETWEEN ELECTROSTATIC INTERACTIONS, STRUCTURE, AND CATALYTIC FUNCTION

Citation
Jm. Perezcanadillas et al., CHARACTERIZATION OF PK(A) VALUES AND TITRATION SHIFTS IN THE CYTOTOXIC RIBONUCLEASE ALPHA-SARCIN BY NMR - RELATIONSHIP BETWEEN ELECTROSTATIC INTERACTIONS, STRUCTURE, AND CATALYTIC FUNCTION, Biochemistry (Easton), 37(45), 1998, pp. 15865-15876
Citations number
77
Categorie Soggetti
Biology
Journal title
ISSN journal
00062960
Volume
37
Issue
45
Year of publication
1998
Pages
15865 - 15876
Database
ISI
SICI code
0006-2960(1998)37:45<15865:COPVAT>2.0.ZU;2-Y
Abstract
The electrostatic behavior of titrating groups in alpha-sarcin was inv estigated using H-1 NMR spectroscopy. A total of 209 chemical shift ti tration curves corresponding to different protons in the molecule were determined over the pH range of 3.0-8.5. Nonlinear least-squares fits of the data to simple relationships derived from the Henderson-Hassel balch equation led to the unambiguous determination of pK(a) values fo r all glutamic acid and histidine residues, as well as for the C-termi nal carboxylate and most of the aspartic acids in the free enzyme. The ionization constants of catalytically relevant histidines, His50 and His137, and glutamic acid, Glu96, in the alpha-sarcin-2'-GMP complex w ere also determined. The pK(a) values of 15 ionizable groups (C-carbox ylate, six aspartic acids, four glutamic acids, and four histidines) w ere found to be close to their normal values. On the other hand, a num ber of side chain groups, including those in the active center, showed pK(a) values far from their intrinsic values. Thus, the pK(a) values for active site residues His50, Glu96, and His137 were 7.7, 5.2, and 5 .8 in the free enzyme and 7.6, similar to 4.8, and 6.8 in the alpha-sa rcin-2'-GMP complex, respectively. The pK(a) values and the activity p rofile against ApA, as a function of pH, are in agreement with the pro posed enzymatic mechanism (in common with RNase T1 and the family of t he microbial ribonucleases), in which Glu96 and His137 act as a genera l base and general acid, respectively. In almost all microbial ribonuc leases, a Phe-His interaction is present, which affects the pK(a) of o ne of the His residues at the active site (His137). The absence of thi s interaction in alpha-sarcin would explain the lower pK(a) value of t his His residue, and provides an explanation for the decreased RNase a ctivity of this protein as compared to those of other microbial ribonu cleases.