CHARACTERIZATION OF PK(A) VALUES AND TITRATION SHIFTS IN THE CYTOTOXIC RIBONUCLEASE ALPHA-SARCIN BY NMR - RELATIONSHIP BETWEEN ELECTROSTATIC INTERACTIONS, STRUCTURE, AND CATALYTIC FUNCTION
Jm. Perezcanadillas et al., CHARACTERIZATION OF PK(A) VALUES AND TITRATION SHIFTS IN THE CYTOTOXIC RIBONUCLEASE ALPHA-SARCIN BY NMR - RELATIONSHIP BETWEEN ELECTROSTATIC INTERACTIONS, STRUCTURE, AND CATALYTIC FUNCTION, Biochemistry (Easton), 37(45), 1998, pp. 15865-15876
The electrostatic behavior of titrating groups in alpha-sarcin was inv
estigated using H-1 NMR spectroscopy. A total of 209 chemical shift ti
tration curves corresponding to different protons in the molecule were
determined over the pH range of 3.0-8.5. Nonlinear least-squares fits
of the data to simple relationships derived from the Henderson-Hassel
balch equation led to the unambiguous determination of pK(a) values fo
r all glutamic acid and histidine residues, as well as for the C-termi
nal carboxylate and most of the aspartic acids in the free enzyme. The
ionization constants of catalytically relevant histidines, His50 and
His137, and glutamic acid, Glu96, in the alpha-sarcin-2'-GMP complex w
ere also determined. The pK(a) values of 15 ionizable groups (C-carbox
ylate, six aspartic acids, four glutamic acids, and four histidines) w
ere found to be close to their normal values. On the other hand, a num
ber of side chain groups, including those in the active center, showed
pK(a) values far from their intrinsic values. Thus, the pK(a) values
for active site residues His50, Glu96, and His137 were 7.7, 5.2, and 5
.8 in the free enzyme and 7.6, similar to 4.8, and 6.8 in the alpha-sa
rcin-2'-GMP complex, respectively. The pK(a) values and the activity p
rofile against ApA, as a function of pH, are in agreement with the pro
posed enzymatic mechanism (in common with RNase T1 and the family of t
he microbial ribonucleases), in which Glu96 and His137 act as a genera
l base and general acid, respectively. In almost all microbial ribonuc
leases, a Phe-His interaction is present, which affects the pK(a) of o
ne of the His residues at the active site (His137). The absence of thi
s interaction in alpha-sarcin would explain the lower pK(a) value of t
his His residue, and provides an explanation for the decreased RNase a
ctivity of this protein as compared to those of other microbial ribonu
cleases.