BACTERIAL IRON TRANSPORT - H-1-NMR DETERMINATION OF THE 3-DIMENSIONALSTRUCTURE OF THE GALLIUM COMPLEX OF PYOVERDIN G4R, THE PEPTIDIC SIDEROPHORE OF PSEUDOMONAS-PUTIDA G4R
Ra. Atkinson et al., BACTERIAL IRON TRANSPORT - H-1-NMR DETERMINATION OF THE 3-DIMENSIONALSTRUCTURE OF THE GALLIUM COMPLEX OF PYOVERDIN G4R, THE PEPTIDIC SIDEROPHORE OF PSEUDOMONAS-PUTIDA G4R, Biochemistry (Easton), 37(45), 1998, pp. 15965-15973
Among the fluorescent Pseudomonas species, Pseudomonas putida is a rar
e case of a nitrogen-fixing bacterium that transforms nitrogen into am
monia. When grown under iron-deficient conditions, it produces two maj
or pyoverdins: pyoverdin G4R and pyoverdin G4RA. Their primary structu
res have been established using FAB-MS and one- and two-dimensional N-
15, C-13, and H-1 NMR on both the unlabeled and N-15-labeled compounds
[Salah El Din, A. L,. M., et al. (1997) Tetrahedron 53, 12539-12552].
The two pyoverdins have a common chromophore derived from 2,3-diamino
-6,7-dihydroxyquinoline. The chromophore is bound to the linear heptap
eptide -D-beta-threo-OHAsp-L-Dab-Gly-L-Ser-L-cyclo-OHOrn. Circular dic
hroism spectra suggest that the absolute configuration of the metal co
mplex is Delta. The three-dimensional structure in solution of pyoverd
in G4R-Ga(III) was determined after interpretation of two-dimensional
H-1 NMR spectra recorded at 283 and 303 K. The complex is tightly defi
ned with a compact structure with a Delta absolute configuration. The
site of complexation of the metal ion is found to be located on the su
rface of the molecule, showing that the ion can be released without la
rge conformational changes, while the polar groups of the peptide chai
n, which may be responsible for the recognition of the receptor, are p
laced on the opposite side of the overall shape. The three-dimensional
structure of pyoverdin G4R-Ga(III) is compared with those of other py
overdins, and the role of the structure in iron uptake is discussed.