Jf. Allemand et al., STRETCHED AND OVERWOUND DNA FORMS A PAULING-LIKE STRUCTURE WITH EXPOSED BASES, Proceedings of the National Academy of Sciences of the United Statesof America, 95(24), 1998, pp. 14152-14157
We investigate structural transitions within a single stretched and su
percoiled DNA molecule. With negative supercoiling, for a stretching f
orce >0.3 pN, we observe the coexistence of B-DNA and denatured DNA fr
om sigma approximate to -0.015 down to sigma = -1. Surprisingly, for p
ositively supercoiled DNA (sigma > +0.037) stretched by 3 pN, we obser
ve a similar coexistence of B-DNA and a new highly twisted structure.
Experimental data and molecular modeling suggest that this structure h
as approximate to 2.62 bases per turn and an extension 75% larger than
B-DNA. This structure has tightly interwound phosphate backbones and
exposed bases in common with Pauling's early DNA structure [Pauling, L
. & Corey, R. B. (1953), Proc. Natl. Acad. Sci. USA 39, 84-97] and an
unusual structure proposed for the Pf1 bacteriophage