The role of Pr55(gag) in the annealing of tRNA44(3)(Lys) to human immunodeficiency virus type 1 genomic RNA

During human immunodeficiency virus type 1 (HIV-1) assembly, the primer tRN A for the reverse transcriptase-catalyzed synthesis of minus-strand strong- stop cDNA, tRNA(3)(Lys), is selectively packaged into the virus and anneale d onto the primer binding site on the RNA genome. Annealing of tRNA(3)(Lys) in HIV-1 is independent of polyprotein processing and is facilitated in vi tro by p7 nucleocapsid (NCp7). We have previously shown that mutations in c lusters of basic amino acids flanking the first Cys-His box in NC sequence inhibit annealing of tRNA(3)(Lys) in vivo by 70 to 80%. In this report, we have investigated whether these NC mutations act through Pr55(gag) or pr160 (gag-pol). In vivo placement of tRNA(3)(Lys) is measured with total viral R NA as the source of primer tRNA-template in an in vitro reverse transcripti on assay. Cotransfection of COS cells,vith a plasmid coding for either muta nt Pr55(gag) or mutant pr160(gag-pol), and with a plasmid containing HIV-1 proviral DNA, shows that only the NC mutations in Pr55(gag) inhibit tRNA(3) (Lys) placement. The NC mutations in Pr55(gag) reduce viral infectivity by 95% and are trans-dominant-negative, i.e., they inhibit genomic placement o f tRNA(3)(Lys) even in the presence of wild-type Pr55(gag). This dominant p henotype may indicate that the mutant Pr55(gag) is disrupting an ordered Pr 55(gag) structure responsible for the annealing of tRNA(3)(Lys) to genomic RNA.