The filamentous fungus Neurospora crassa contains many small vacuoles. Thes
e organelles contain high concentrations of polyphosphates and basic amino
acids, such as arginine and ornithine. Because of their size and density, t
he vacuoles can be separated from other organelles in the cell. The ATP-dri
ven proton pump in the vacuolar membrane is a typical V-type ATPase. We exa
mined the size and structure of this enzyme using radiation inactivation an
d electron microscopy. The vacuolar ATPase is a large and complex enzyme, w
hich appears to contain at least thirteen different types of subunits. We h
ave characterized the genes that encode eleven of these subunits. In this r
eview, we discuss the possible function and structure of these subunits.