Automatic determination of diffuse-peak positions and the centre of a diffraction pattern

Citation
Sj. Wilkinson et Dwl. Hukins, Automatic determination of diffuse-peak positions and the centre of a diffraction pattern, J APPL CRYS, 32, 1999, pp. 332-335
Citations number
16
Categorie Soggetti
Physical Chemistry/Chemical Physics
Journal title
JOURNAL OF APPLIED CRYSTALLOGRAPHY
ISSN journal
00218898 → ACNP
Volume
32
Year of publication
1999
Part
2
Pages
332 - 335
Database
ISI
SICI code
0021-8898(19990401)32:<332:ADODPA>2.0.ZU;2-9
Abstract
Correlation with a two-dimensional Gaussian function was used to locate the positions of diffuse peaks in X-ray diffraction patterns. The centre of a pattern was defined as the centroid of the image of the undeflected beam, f ound by convolution with a two-dimensional Gaussian function. These methods were implemented using the IDL programing language. They were tested on di ffraction patterns from systems containing oriented molecules of the protei n collagen: collagen tape, elastoidin spicules and annulus fibrosus of inte rvertebral disc. Specimens were dusted with quartz to calibrate the diffrac tion patterns. These patterns were recorded on film, using a semi-transpare nt beam stop to obtain an image of the undeflected beam, and digitized at a resolution of 105 mu m. Intermolecular spacings, calculated from the dista nce between a peak and the centre of a pattern, were in good agreement with those determined previously.