FINDNCS: a program to detect non-crystallographic symmetries in protein crystals from heavy-atom sites

Authors
Citation
Gg. Lu, FINDNCS: a program to detect non-crystallographic symmetries in protein crystals from heavy-atom sites, J APPL CRYS, 32, 1999, pp. 365-368
Citations number
9
Categorie Soggetti
Physical Chemistry/Chemical Physics
Journal title
JOURNAL OF APPLIED CRYSTALLOGRAPHY
ISSN journal
00218898 → ACNP
Volume
32
Year of publication
1999
Part
2
Pages
365 - 368
Database
ISI
SICI code
0021-8898(19990401)32:<365:FAPTDN>2.0.ZU;2-#
Abstract
In order to facilitate applications of averaging techniques in the MIR/MAD procedure, a program, FINDNCS, which automatically identifies non-crystallo graphic symmetry (NCS) from heavy-atom sites, has been developed. The progr am outputs the NCS operations (a rotation matrix and a translation vector), the corresponding root-mean-square (r.m.s) deviations of heavy-atom sites, polar angles and screw translations, and writes coordinates of matching si tes in Protein Data Bank (PDB) format. The program has an interface with th e graphics program O [Jones ct al. (1991). Acta Cryst. A47, 110-119] so tha t the NCS operations can be displayed automatically. In the test examples, all the correct NCS operations were identified and were above the noise sol utions.