A duster of flagellar genes of Borrelia burgdorferi was identified and
sequenced. This cluster comprises an operon, designated the flgK oper
on, which is initiated by a sigma(70)-like promoter. The flgK operon c
onsists of flbF (function unknown), flgK (encoding HAP1), flgL (encodi
ng HAP3) and orfX (function unknown), and maps at 185 kb on the chromo
some. In other bacteria, the hook-associated proteins HAP1 and HAP3 co
nnect the flagellar filament to the hook and are required for the last
stage of flagellar assembly. Reverse transcriptase-PCR analysis indic
ated that flbF through to orfX are transcribed as a single mRNA, and p
rimer extension analysis revealed that transcription of the flgK opero
n is initiated by a sigma(70)-like promoter upstream of flbF. Subcloni
ng the flgK promoter element into a promoter probe cat vector revealed
that the flgK promoter element had strong activity in both Escherichi
a coli and Salmonella typhimurium. In addition, when this construct wa
s transformed into a fliA mutant of 5, typhimurium which lacked a func
tional flagellar-specific sigma(28) factor, the flgK promoter was stil
l functional. Based on these results, the promoter element of the flag
ellin gene (fla, hereafter referred to as flag) was re-examined, flag
encodes the flagellar filament protein, and a sigma(gp33-34)-like prom
oter has been reported to be involved in the transcription of this gen
e. A transcriptional start point was found 1 bp downstream of the repo
rted start site. The sequence around -10 and -35 are consistent with t
he presence of a sigma(70)-like promoter in addition to the putative s
igma(gp33-34)-like promoter for flag. In contrast to the flgK promoter
element, no activity was detected after subcloning a flaB promoter el
ement into the promoter probe cat vector. Because a sigma(70)-like pro
moter rather than a unique flagellar sigma factor is involved in the l
ater stage of flagellar assembly, the regulation of B. burgdorferi fla
gellar genes is evidently different from that of other bacteria.