Sequence analysis of the Rhizobium etli ribose kinase gene rbsK and its phylogenetic position

Citation
J. Michiels et al., Sequence analysis of the Rhizobium etli ribose kinase gene rbsK and its phylogenetic position, DNA SEQ, 9(5-6), 1998, pp. 317-321
Citations number
10
Categorie Soggetti
Molecular Biology & Genetics
Journal title
DNA SEQUENCE
ISSN journal
10425179 → ACNP
Volume
9
Issue
5-6
Year of publication
1998
Pages
317 - 321
Database
ISI
SICI code
1042-5179(1998)9:5-6<317:SAOTRE>2.0.ZU;2-Q
Abstract
DNA sequence analysis of a 1878-bp DNA fragment located downstream from the Rhizobium etli ptsN gene revealed the presence of an open reading frame co ding for a protein of 300 amino acids. This protein is homologous to member s of the PfkB subfamily of carbohydrate and carbohydrate phosphate kinases. Since the highest homology is observed with the ribokinases of Escherichia coli, Haemophilus influenzae and Bacillus subtilis, the isolated gene was named the R. etli rbsK gene. The eubacterial ribokinases form a cluster dis tinct from the cluster of ribokinase proteins of the archaebacteria Methano bacterium thermoautotrophicum, Methanococcus jannaschii and Sulfolobus solf oataricus, which form a more divergent group of proteins. R. etli RbsK has a molecular mass of 30.6 kDa and a calculated isoelectric point of 4.5. No homologues of Escherichia coli ORF284 and ORF90 were found downstream from R. etli ptsN.