Algorithmic challenges in computational molecular biophysics

Citation
T. Schlick et al., Algorithmic challenges in computational molecular biophysics, J COMPUT PH, 151(1), 1999, pp. 9-48
Citations number
138
Categorie Soggetti
Physics
Journal title
JOURNAL OF COMPUTATIONAL PHYSICS
ISSN journal
00219991 → ACNP
Volume
151
Issue
1
Year of publication
1999
Pages
9 - 48
Database
ISI
SICI code
0021-9991(19990501)151:1<9:ACICMB>2.0.ZU;2-Z
Abstract
A perspective of biomolecular simulations today is given, with illustrative applications and an emphasis on algorithmic challenges, as reflected by th e work of a multidisciplinary team of investigators from five institutions. Included are overviews and recent descriptions of algorithmic work in long -time integration for molecular dynamics; fast electrostatic evaluation; cr ystallographic refinement approaches; and implementation of large, computat ion-intensive programs on modem architectures. Expected future developments of the field are also discussed, (C) 1999 Academic Press.