1. Measurements of ecological patterns are often used as primary biological
indicators of river health. However, these patterns provide little informa
tion about important stream ecosystem processes (e.g. the sources and fate
of energy and nutrients). The direct measurement of these processes is cons
idered fundamental to the determination of the health of stream and river e
cosystems.
2. In this paper we used two basic approaches to assess stream ecosystem re
sponse to catchment disturbance and, particularly, to the loss of riparian
vegetation in different forested biomes across Australia. Benthic gross pri
mary production (GPP) and respiration (R-24) provided measures of the amoun
ts of organic carbon produced and consumed within the system, respectively.
Stable isotope analysis was used to trace the fate of terrestrial and inst
ream sources of organic matter in the aquatic food web. In a focal catchmen
t in SE Queensland, additional measurements were taken of riparian attribut
es, catchment features and water quality.
3. Baseline measurements of GPP and R-24 from undisturbed forest streams pr
ovided reference values for healthy streams for comparison with sites where
the catchment or riparian vegetation had been disturbed. These values of m
etabolism were low by world standards in all biomes examined. Preliminary d
ata from the Mary River catchment in SE Queensland indicated that these par
ameters were sensitive to variations in riparian canopy cover and, to a les
ser extent, catchment clearing, and predictive models were developed. The r
atio P : R (GPP : R-24) was used to determine whether sites were net consum
ers (P < R) or producers (P > R) of carbon but this was not considered a re
liable indicator of stream health on its own.
4. Although forest streams were typically net consumers of carbon (P < < R)
, stable isotope analysis of metazoan food webs indicated a high dependence
on inconspicuous epilithic algae in some biomes.
5. A dramatic decline in the health of forest streams was observed when GPP
substantially exceeded R-24 especially when instream primary producers shi
fted from palatable unicellular algae to prolific filamentous green algae a
nd macrophytes. These sources of instream production do not appear to enter
aquatic food webs, either directly through grazing or indirectly through a
detrital loop. Accumulation of these plants has led to changes in channel
morphology, loss of aquatic habitat and often a major decline in water qual
ity in some of the streams studied.