Fas (CD95), a member of the tumor necrosis factor receptor superfamily, and
its ligand (FasL), a tumor necrosis factor-like protein, are intensely stu
died because their interaction on the cell surface is critical for the indu
ction of programmed cell death (apoptosis) and the regulation of immune res
ponses. The structure and specificity of the extracellular binding domains
of Fas and its ligand were studied, in different laboratories, by combining
molecular modeling, mutagenesis, and a variety of binding and functional e
xperiments. Residues critical for the receptor-ligand interaction were iden
tified and, in the absence of experimentally determined structures, binding
sites and details of the Fas-ligand interactions were predicted. These stu
dies provide an instructive example for the close combination of prediction
and experiment and illustrate how insights into the structure and binding
characteristics of Fas and its ligand were gradually refined. Discussed met
hodological aspects are representative of structure-function studies on ext
racellular domains of other single-path transmembrane proteins. Proteins 19
99;35:475-482, (C) 1999 Wiley-Liss, Inc.