We generated random mutations in Synechococcus sp. strain PCC 7942 to look
for genes of output pathways in the cyanobacterial circadian system. A deri
vative of transposon Tn5 was introduced into the chromosomes of reporter st
rains in which cyanobacterial promoters drive the Vibrio harveyi luxAB gene
s and produce an oscillation of bioluminescence as a function of circadian
gene expression. Among low-amplitude mutants, one mutant, tnp6, had an inse
rtion in a 780-bp open reading frame. The tnp6 mutation produced an altered
circadian phasing phenotype in the expression rhythms of psbAI::luxAB, psb
AII::luxAB, and kaiA::luxAB but had no or little effect on those of psbAIII
::luxAB, purF::luxAB, kaiB::luxAB, rpoD2::luxAB, ndhD::luxAB, and conII::lu
xAB. This suggests that the interrupted gene in tnp6, named cpmA (circadian
phase modifier), is part of a circadian output pathway that regulates the
expression rhythms of psbAI, psbAII, and kaiA.