A group of campylobacters isolated from river water were found to possess u
nusually large flagellin genes. Both phenotype and serology were consistent
with identification as Campylobacter coli. Phylogenetic analysis of small
(16S, rus) and large subunit (23S, rrl) rRNA genes of a representative stra
in, NCTC 13006, demonstrated high levels of relatedness with C. jejuni and
C. coli (99.1 and 98.3% similarity for 16S; 99.3 and 99.4% similarity for 2
3S). Large flagellin proteins were demonstrated by SDS-PAGE analysis. The f
laA and flaB genes were sequenced and aligned with known campylobacter flag
ellin amino acid sequences. The encoded FlaA protein of the new group exhib
ited a high degree of divergence from other Campylobacter species. Within t
he central variable region of maA, a further hypervariable domain was ident
ified containing characteristic repeated motifs. Separate pairwise alignmen
ts performed for the variable regions of the polypeptide indicated these la
rge fla genes were more closely related to those of C. upsaliensis than to
those of C. coli or C. jejuni. (C) Elsevier, Paris.