During the development of the vertebrate embryo, genes encoding components
of the Notch signaling pathway are required for subdividing the paraxial me
soderm into repeating segmental structures, called somites. These genes are
thought to act in the presomitic mesoderm when cells form prospective somi
tes, called somitomeres, but their exact function remains unknown. To addre
ss this issue, we have identified two novel genes, called ESR-4 and ESR-5,
which are transcriptionally activated in the somitomeres of Xenopus embryos
by the Su(H)-dependent Notch signaling pathway. We show that the expressio
n of these genes divides each somitomere into an anterior and posterior hal
f, and that this pattern of expression is generated by a mechanism that act
ively represses the expression of the Notch pathway genes when paraxial cel
ls enter a critical region and form a somitomere. Repression of Notch signa
ling during somitomere formation requires a negative feedback loop and inhi
biting the activity of genes in this loop has a profound effect on somitome
re size. Finally we present evidence that once somitomeres form, ESR-5 medi
ates a positive feedback loop, which maintains the expression of Notch path
way genes. We propose a model in which Notch signaling plays a key role in
both establishing and maintaining segmental identity during somitomere form
ation in Xenopus embryos.