The transcription factor FIS has been implicated in the regulation of sever
al stable RNA promoters, including that for the major tRNA(Leu) species in
Escherichia coli, tRNA(1)(Leu). However, no evidence for direct involvement
of FIS in tRNA(1)(Leu) expression has been reported. We show here that FIS
binds to a site upstream of the leuV promoter (centered at -71) and that i
t directly stimulates leuV transcription in vitro. A mutation in the FIS bi
nding site reduces transcription from a leuV promoter in strains containing
FIS but has no effect on transcription in strains lacking FIS, indicating
that FIS contributes to leuV expression in vivo. We also find that RNA poly
merase forms an unusual heparin-sensitive complex with the leuV promoter, h
aving a downstream protection boundary of similar to-7, and that the first
two nucleotides of the transcript, GTP and UTP, are required for formation
of a heparin-stable complex that extends downstream of the transcription st
art site. These studies have implications for the regulation of leuV transc
ription.