The role of calcium ions in the regulation of tissue transglutaminase is in
vestigated by experimental approaches and computer modeling. A three-dimens
ional model of the transglutaminase is computed by homology building on cry
stallized human factor XIII and is used to interpret structural and functio
nal results. The molecule is a prolate ellipsoid (6.2 x 4.2 x 11 nm) and co
mprises four domains, assembled pairwise into N-terminal and C-terminal reg
ions. The active site is hidden in a cleft between these regions and is ina
ccessible to macromolecular substrates in the calcium-for form, Protein dyn
amics simulation indicates that these regions move apart upon addition of c
alcium ions, revealing the active site for catalysis.
The protein dimensions are consistent with results obtained with small-angl
e neutron and X-rap scattering. The gyration radius of the protein (3 nm) i
ncreases in the presence of calcium ions (3.9 nm), but it is virtually unaf
fected in the presence of GTP, suggesting that only calcium ions can promot
e major structural changes in the native protein. Proteolysis of an exposed
loop connecting the N-terminal and C-terminal regions is linearly correlat
ed with enzyme inactivation and prevents the calcium-induced conformational
changes.