DNA hybridization to oligonucleotide microchip. Correlations and screeningfor errors

Citation
Av. Favorov et al., DNA hybridization to oligonucleotide microchip. Correlations and screeningfor errors, MOL BIOL, 33(3), 1999, pp. 374-378
Citations number
13
Categorie Soggetti
Molecular Biology & Genetics
Journal title
MOLECULAR BIOLOGY
ISSN journal
00268933 → ACNP
Volume
33
Issue
3
Year of publication
1999
Pages
374 - 378
Database
ISI
SICI code
0026-8933(199905/06)33:3<374:DHTOMC>2.0.ZU;2-5
Abstract
Here we propose an algorithm for mathematical processing of the primary dat a on DNA hybridization on an oligonucleotide microchip, obviating most fals e positives. Such errors are revealed by the absence of the corresponding o verlapping oligonucleotide signals. The screen efficiency depending on the length of oligonucleotide and DNA probe as well as the initial number of fa lse positives was evaluated in theory and by computer simulation.