Lambda clones of mouse DNA from BALB/c and C57BL/10, each containing a
n array of telomere hexamers, were localized by FISH to a region close
to the telomere of Chr 13. Amplification of mouse genomic DNA with pr
imers flanking SSRs within the cloned DNA showed several alleles, whic
h were used to type eight sets of RI strains. The two lambda clones co
ntained allelic versions of the interstitial telomere array, Tel-rs4,
which is 495 bp in C57BL/10 and which includes a variety of sequence c
hanges from the consensus telomere hexamer. Comparison of the segregat
ion of the amplification products of the SSRs with the segregation of
other loci in an interspecies backcross (C57BL/6JEi x SPRET/Ei) F-1 x
SPRET/Ei shows recombination suppression, possibly associated with rib
osomal DNA sequences present on distal Chr 13 in Mus spretus, when com
pared with recombination in an interstrain backcross, (C57BL/6J x DBA/
J) F-1 x C57BL/6J, and with the MIT F-2 intercross. Analysis of recomb
ination in females using a second interstrain backcross, (ICR/Ha x C57
BL/6Ha) F-1 x C57BL/6Ha, also indicates recombination suppression when
compared with recombination in males of the same strains, using backc
ross C57BL/6Ha x (TCR/Ha x C57BL/6Ha) F-1. Thus, more than one cause m
ay contribute to recombination suppression in this region. The combine
d order of the loci typed was D13Mit37-D13Mit30-D13Mit148 (D13Rp1, 2,
3, 4, Tel-rs4)-D13Mit53-D13Mit196-D13Mit77- (D13Mit78, 35). Data from
crosses where apparently normal frequencies of recombination occur sug
gest that the telomere array is about 6 map units proximal to the most
distal loci on Chr 13. This distance is consistent with evidence from
markers identified in two YAC clones obtained from the region.