A rigorous statistical mechanical formulation of the equilibrium properties
of selective ion channels is developed, incorporating the influence of the
membrane potential, multiple occupancy, and saturation effects. The theory
provides a framework for discussing familiar quantities and concepts in th
e context of detailed microscopic models. Statistical mechanical expression
s for the free energy profile along the channel axis, the cross-sectional a
rea of the pore, and probability of occupancy are given and discussed. In p
articular, the influence of the membrane voltage, the significance of the e
lectric distance, and traditional assumptions concerning the linearity of t
he membrane electric field along the channel axis are examined. Important f
indings are: 1) the equilibrium probabilities of occupancy of multiply occu
pied channels have the familiar algebraic form of saturation properties whi
ch is obtained from kinetic models with discrete states of denumerable ion
occupancy (although this does not prove the existence of specific binding s
ites; 2) the total free energy profile of an ion along the channel axis can
be separated into an intrinsic ion-pore free energy potential of mean forc
e, independent of the transmembrane potential, and other contributions that
arise from the interfacial polarization; 3) the transmembrane potential ca
lculated numerically for a detailed atomic configuration of the gramicidin
A channel embedded in a bilayer membrane with explicit lipid molecules is s
hown to be closely linear over a distance of 25 Angstrom along the channel
axis. Therefore, the present analysis provides some support for the constan
t membrane potential field approximation, a concept that has played a centr
al role in the interpretation of flux data based on traditional models of i
on permeation. It is hoped that this formulation will provide a sound physi
cal basis for developing nonequilibrium theories of ion transport in select
ive biological channels.