Auxotrophic mutants may have physiological alterations and sensitivities wh
ich are not generally recognized. Such features are shown here by observati
ons that final cell densities attained by several leucine-auxotrophic Sacch
aromyces cerevisiae strains depend differently on the initial leucine conce
ntration in the medium. Furthermore, complementing such auxotrophic strains
with the plasmid-based LEU2 selection marker resulted in different final c
ell densities than chromosomal expression of LEU2 in the otherwise isogenic
, prototrophic strains. These results warn that auxotrophic host-related ph
ysiological influences overlay any metabolic effect of a cloned gene expres
sed in such a host, clearly complicating interpretation of the effect of th
at gene's product in scientific or metabolic engineering research.