Sleep is a complex trait controlled by many genes, the environment, and pro
bably by gene-environment interactions. Among different approaches to the g
enetics of sleep, analysis of quantitative traits (QTL) has the advantage o
f being able to detect, along with major genes, minor and/or modifier genes
influencing different quantitative aspects of sleep. We have used QTL anal
ysis in two different sets of recombinant inbred (RI) strains and sought fo
r confirmation of several localizations in eight histocompatibility congeni
c strains. Several QTLs were identified which influenced the amount of vigi
lance states. In a first RI series (seven strains) the only QTLs identified
were those affecting paradoxical sleep (PS), whereas analysis in a second
RI series (25 strains) revealed QTLs influencing PS, slow-wave sleep, and t
otal sleep. Among these, a single QTL on chromosome 5 was associated with a
ll vigilance stales, suggesting the presence of a major gene influencing a
basic aspect of sleep amount. Search for candidate genes around the identif
ied QTLs indicated several immune related genes that have been implicated i
n sleep regulation. Transgenic animals carrying loss-of-function and/or gai
n-of-function mutations affecting these candidate genes should confirm thes
e findings.