Ev. Benevolenskaya et al., SEGMENTED GENE CONVERSION AS A MECHANISM OF CORRECTION OF 18S RIBOSOMAL-RNA PSEUDOGENE LOCATED OUTSIDE OF RDNA CLUSTER IN DROSOPHILA-MELANOGASTER, Journal of molecular evolution, 44(6), 1997, pp. 646-651
The peculiarities of the sequences of 18S rDNA included in a 90-kb DNA
segment cloned in YAC vector are described. This heterochromatic segm
ent is situated on the X chromosome distal to the main rDNA cluster. T
he pseudo 18S rDNA sequence comprised undamaged stretches of rDNA inte
rspersed with segments characterized by high density of nucleotide sub
stitutions and insertions/deletions. The observed patchwork arrangemen
t of unaltered rDNA sequences was considered as evidence of segmented
gene conversion events between the normal and damaged genes which are
thought to constitute one of the mechanisms of rDNA array homogenizati
on. The 18S rDNA fragment (510 bp) located nearby, homologous to the i
nternal, undamaged part of pseudo 18S rDNA, carries comparable density
of randomly distributed nucleotide substitutions with no evidence of
correction.