Recent development of in vivo microscopy techniques, including green fluore
scent proteins, has allowed the visualization of a wide range of dynamic pr
ocesses in living cells. For quantitative and visual interpretation of such
processes, new concepts for time-resolved image analysis and continuous ti
me-space visualization are required. Here, me describe a versatile and full
y automated approach consisting of four techniques, namely highly sensitive
object detection, fuzzy logic-based dynamic object tracking, computer grap
hical visualization, and measurement in time-space. Systematic model simula
tions were performed to evaluate the reliability of the automated object de
tection and tracking method. To demonstrate potential applications, the met
hod was applied to the analysis of secretory membrane traffic and the funct
ional dynamics of nuclear compartments enriched in pre-mRNA splicing factor
s.