A method for the efficient management and utilization of large germplasm collections

Citation
Dz. Skinner et al., A method for the efficient management and utilization of large germplasm collections, CROP SCI, 39(4), 1999, pp. 1237-1242
Citations number
12
Categorie Soggetti
Agriculture/Agronomy
Journal title
CROP SCIENCE
ISSN journal
0011183X → ACNP
Volume
39
Issue
4
Year of publication
1999
Pages
1237 - 1242
Database
ISI
SICI code
0011-183X(199907/08)39:4<1237:AMFTEM>2.0.ZU;2-0
Abstract
To make efficient use of large germplasm collections, it is advisable to as semble a representative core collection and to evaluate the relationships a mong the traits studied. However, the assemblage of a core collection from very large germplasm collections is problematic The computing resources nee ded to carry out genetic distance calculations and comparisons with commonl y available programs is prohibitively large. The objects of this study were (i) to develop a method which assembles a core collection by maximizing th e diversity (measured as mean Euclidean distance) from within groups of acc essions defined by species, subspecies, and geographic origin and (ii) to t est the effectiveness of the method on a collection of 20 997 annual Medica go accessions from the Australian Medicago Resource Center in Adelaide, Sou th Australia, that bad been evaluated for 27 agronomic characteristics. The method resulted in a core collection of 1705 accessions that represented 7 4% of the extremes of the 27 characters, indicating that the entire range o f the characters was represented in most cases. Accessions representing the extremes easily could be added to the core collection. The method used req uires relatively minor computing resources and should be useful to curators of large germplasm collections. To assess the relationships among the 27 m easured traits, correlation coefficients of all possible combinations of tr aits were calculated. The most strongly associated traits were, as expected , such traits as grams of seed per plant and grams of pods per plant and in dicated that some traits could be omitted from future evaluations with litt le loss of information, thereby increasing the efficiency with which germpl asm evaluations can be carried out.