The intracellular transport of soluble lysosomal enzymes relies on the post
-translational modification of N-linked oligosaccharides to generate mannos
e 6-phosphate (Man 6-P) residues. In most cell types the Man 6-P signal is
rapidly removed after targeting of the precursor proteins from the Golgi to
lysosomes via interactions with Man 6-phosphate receptors, However, in bra
in, the steady state proportion of lysosomal enzymes containing Man 6-P is
considerably higher than in other tissues. As a first step toward understan
ding the mechanism and biological significance of this observation, we anal
yzed the subcellular localization of the rat brain Man 6-P glycoproteins by
combining biochemical and morphological approaches, The brain Man 6-P glyc
oproteins are predominantly localized in neuronal lysosomes with no evidenc
e for a steady state localization in nonlysosomal or prelysosomal compartme
nts. This contrasts with the clear endosome-like localization of the low st
eady state proportion of mannose-6-phosphorylated lysosomal enzymes. in liv
er. It therefore seems Likely that the observed high percentage of phosphor
ylated species in brain is a consequence of the accumulation of lysosomal e
nzymes in a neuronal lysosome that does not fully dephosphorylate the Man 6
-P moieties.