Background: Mammalian purple acid phosphatases are highly conserved binucle
ar metal-containing enzymes produced by osteoclasts, the cells that resorb
bone. The enzyme is a target for drug design because there is strong eviden
ce that it is involved in bone resorption.
Results: The 1.55 Angstrom resolution structure of pig purple acid phosphat
ase has been solved by multiple isomorphous replacement. The enzyme compris
es two sandwiched beta sheets flanked by or-helical segments. The molecule
shows internal symmetry, with the metal ions bound at the interface between
the two halves.
Conclusions: Despite less than 15% sequence identity, the protein fold rese
mbles that of the catalytic domain of plant purple acid phosphatase and som
e serine/threonine protein phosphatases. The active-site regions of the mam
malian and plant purple acid phosphatases differ significantly, however. Th
e internal symmetry suggests that the binuclear centre evolved as a result
of the combination of mononuclear ancestors. The structure of the mammalian
enzyme provides a basis for antiosteoporotic drug design.