Use of RAPD (random amplified polymorphic DNA) to analyse genetic diversity of dematiaceous fungal pathogens

Citation
Rb. Caligiorne et al., Use of RAPD (random amplified polymorphic DNA) to analyse genetic diversity of dematiaceous fungal pathogens, CAN J MICRO, 45(5), 1999, pp. 408-412
Citations number
29
Categorie Soggetti
Biotecnology & Applied Microbiology",Microbiology
Journal title
CANADIAN JOURNAL OF MICROBIOLOGY
ISSN journal
00084166 → ACNP
Volume
45
Issue
5
Year of publication
1999
Pages
408 - 412
Database
ISI
SICI code
0008-4166(199905)45:5<408:UOR(AP>2.0.ZU;2-D
Abstract
Thirteen strains of chromoblastomycosis and phaeohyphomycosis etiologic age nt fungi were obtained from different geographical origins. These strains w ere genotypically compared by means of the RAPD (Random Amplified Polymorph ic DNA) technique. The data generated showed a high degree of polymorphism between distinct species and a low polymorphism between strains of the same species. The results generated by these tests were subjected to a numerica l taxonomy analysis, using the unweighted pair-group method. A phenogram wa s constructed for the set of strains studied. Based on its structure, we co ncluded that genotypical data provide enough information to us to use the u nweighted pair-group method to cluster the strains in accordance to their r espective species. The phenogram grouped in a single branch the strains of Fonsecaea pedrosoi and F. compacta species, indicating a great similarity b etween these fungi, and suggesting that the classification as distinct spec ies may not be appropriate for these species of the genus Fonsecaea.