Determination of abundance and biovolume of bacteria in sediments by dual staining with 4 ',6-diamidino-2-phenylindole and acridine orange: Relationship to dispersion treatment and sediment characteristics

Citation
T. Kuwae et Y. Hosokawa, Determination of abundance and biovolume of bacteria in sediments by dual staining with 4 ',6-diamidino-2-phenylindole and acridine orange: Relationship to dispersion treatment and sediment characteristics, APPL ENVIR, 65(8), 1999, pp. 3407-3412
Citations number
22
Categorie Soggetti
Biology,Microbiology
Journal title
APPLIED AND ENVIRONMENTAL MICROBIOLOGY
ISSN journal
00992240 → ACNP
Volume
65
Issue
8
Year of publication
1999
Pages
3407 - 3412
Database
ISI
SICI code
0099-2240(199908)65:8<3407:DOAABO>2.0.ZU;2-J
Abstract
We measured the abundance and biovolume of bacteria in intertidal sediments from Tokyo Bay, Japan, by using a dual-staining technique (4',6-diamidino- 2-phenylindole and acridine orange) and several dispersion techniques (ultr asonic cleaner, ultrasonic sonicator, and tissue homogenizer). Dual stainin g reduced serious background fluorescence, particularly when used for silt- , clay-, and detritus-rich sediments, and allowed us to distinguish bacteri a from other objects during both counting and sizing. Within the studied sa mples, the number of bacterial cells ranged from 0.20 x 10(9) to 3.54 x 10( 9) g of wet sediment(-1). With the cleaner and sonicator treatments, the ba cterial numbers for all of the sites initially increased with dispersion ti me and then became constant. For the homogenizer treatments, the highest ba cterial numbers were observed with the shortest (0.5- to 2-min) treatments, and the counts then declined steeply as the homogenization time increased, indicating that cell destruction occurred. The cleaner treatment had the p ossibility of insufficient dispersion of bacteria for fine-grain sediments. Within the studied samples, the bacterial biovolume ranged from 0.07 to 0. 22 mu m(3). With the cleaner and sonicator treatments, the biovolume peaked during the shorter dispersion time. This pattern was caused not by cell de struction but by the incremental portion of dispersed small cells. We concl uded that with the cleaner and sonicator treatments, the longer dispersion time reflected the real size spectrum and was preferable for accurate estim ation of mean bacterial biovolumes.