Randomly amplified polymorphic DNA (RAPD) markers can be useful in variety
identification or to analyse the relationships among genotypes. RAPD analys
es were conducted on 67 modem and vintage cultivated tomato accessions and
eight accessions of wild Lycopersicon species, using six selected primers.
Considering all the accessions, 104 bands, 58 of which polymorphic, were sc
ored. Within cultivated L. esculentum, 68 total and 22 polymorphic bands we
re detected. Duplicate amplifications of the same DNA samples showed a high
reproducibility of the RAPD protocol. Differences in RAPD profiles between
seed lots of the same accession were seldomly observed. Cluster analysis a
llowed us to distinguish clearly L. esculentum from the wild species. Withi
n L. esculentum, two major groups were identified, the first included all t
he fresh market varieties and the vintage processing varieties, and the sec
ond included most of the modern processing varieties. In the latter group,
the dendrogram showed subgroups including standard Varieties and their deri
vatives obtained through backcross or pedigree selection. RAPD analysis did
not distinguish cultivars indicated as synonyms or selected from the same
standard variety; in only a few cases, types clearly different at the pheno
typic level were not discriminated. The RAPD approach showed considerable p
otential for tomato variety identification and discrimination.