The stacking boundary (SB) in capillary electrophoresis (CE) is elucidated.
The SE is different from the electrolyte boundaries; for example, the comp
osition of the SE changes with time while the composition of the electrolyt
e boundaries ideally does not change with time. All these boundaries origin
ate from an original concentration boundary found between the sample soluti
on and background solution zones before application of voltage. The differe
nces in electrophoretic mobilities cause them to separate from each other,
as verified from the enhanced field Vacancy CE experiments and a special ex
periment. Theoretical and some experimental studies on the fate of analyte
zones in vacancy and differential CE are presented. Some equations are deri
ved that provide insight into the behavior of analyte zones in enhanced fie
ld vacancy CE. Furthermore, it was found that the composition and especiall
y the conductivity of the sample solution in vacancy and differential CE ex
periments are crucial in maintaining reproducibility of data and reliabilit
y for qualitative and quantitative analysis. (C) 1999 John Wiley & Sons, In
c.