REVERSED AND SANDWICHED ANALOGS OF DUOCARMYCIN SA - ESTABLISHMENT OF THE ORIGIN OF THE SEQUENCE-SELECTIVE ALKYLATION OF DNA AND NEW INSIGHTS INTO THE SOURCE OF CATALYSIS

Citation
Dl. Boger et al., REVERSED AND SANDWICHED ANALOGS OF DUOCARMYCIN SA - ESTABLISHMENT OF THE ORIGIN OF THE SEQUENCE-SELECTIVE ALKYLATION OF DNA AND NEW INSIGHTS INTO THE SOURCE OF CATALYSIS, Journal of the American Chemical Society, 119(21), 1997, pp. 4987-4998
Citations number
56
Categorie Soggetti
Chemistry
ISSN journal
00027863
Volume
119
Issue
21
Year of publication
1997
Pages
4987 - 4998
Database
ISI
SICI code
0002-7863(1997)119:21<4987:RASAOD>2.0.ZU;2-J
Abstract
The synthesis and examination of two unique classes of duocarmycin SA analogs are described which we refer to as reversed and sandwiched ana logs. Their examination established both the origin of the DNA alkylat ion selectivity and that both enantiomers of this class of natural pro ducts are subject to the same polynucleotide recognition features. The most beautiful demonstration of this is the complete switch in the en antiomeric alkylation selectivity of the reversed analogs which is onl y consistent with the noncovalent binding model and incompatible with alkylation site models of the origin of the DNA alkylation selectivity . In addition, dramatic alterations in the rates of DNA alkylation wer e observed among the agents and correlate with the presence or absence of an extended, rigid N-2 amide substituent. This has led to the prop osal of a previously unrecognized source of catalysis for the DNA alky lation reaction which was introduced in the preceding paper of this is sue.