Cyclic nucleotide-gated (CNG) ion channels mediate the response to light in
retinal rods. They are tetramers of two homologous subunits (alpha and bet
a), each of which is essential for the function of the channels in vivo. We
have investigated the stoichiometry and arrangement of these two subunits
to determine how they come together within an individual channel complex. W
e exploited the very specific geometric and spatial requirements for formin
g a high-affinity Ni2+-binding site to examine the number and relative posi
tions of the subunits. We found that only an order of alpha/alpha/beta/beta
could account qualitatively and quantitatively for the observed intersubun
it coordination of Ni2+ in wild-type and mutant alpha/beta channels. Furthe
rmore, our results suggest a structural dimerization among like subunits, a
t least at the level of the Ni2+-binding site.