The structure of I-Crel provides the first view of a protein encoded b
y a gene within an intron. This endonuclease recognizes a long DNA sit
e similar to 20 base pairs in length and facilitates the lateral trans
fer of that intron. The protein exhibits a DNA-binding surface consist
ing of four antiparallel beta-strands that form a 20 A wide groove whi
ch is over 70 Angstrom long, The architecture of this fold is differen
t from that of the TATA binding protein, TBP, which also contains an a
ntiparallel beta-saddle. The conserved LACLIDADG motif, which is found
in many mobile intron endonucleases, maturases and inteins, forms a n
ovel helical interface and contributes essential residues to the activ
e site.