Low solubility is a major stumbling block in the detailed structural and fu
nctional characterization of many proteins and isolated protein domains. Th
e production of some proteins in a soluble form may only be possible throug
h alteration of their sequences by mutagenesis. The feasibility of this app
roach has been demonstrated in a number of cases where amino acid substitut
ions were shown to increase protein solubility without altering structure o
r function. However, identifying residues to mutagenize to increase solubil
ity is difficult, especially in the absence of structural knowledge. For th
is reason, we have developed a method by which soluble mutants of an insolu
ble protein can be easily distinguished in vivo in Escherichia coli. This m
ethod is based on our observation that cells expressing fusions of an insol
uble protein to chloramphenicol acetyltransferase (CAT) exhibit decreased r
esistance to chloramphenicol compared to fusions with soluble proteins. We
found that a soluble mutant of an insoluble protein fused to CAT could be s
elected by plating on high levels of chloramphenicol.